bioconda/bioconda-recipes
Nov 2025 – Nov 2025
1 Month active
Languages Used
BashYAML
Technical Skills
YAML configurationbioinformaticsbuild automationpackage managementscript writing
Johan Bengtsson-Palme
PROFILE
Johan Bengtsson-palme
Johan developed and released the MetaxaQR tool in the bioconda-recipes repository, enabling identification and taxonomic classification of rRNA in metagenomic datasets. He focused on robust YAML configuration and Bash scripting to automate the build and packaging process, ensuring reproducibility and compliance with licensing requirements. Johan updated the package to the 2.0 rc2 release, aligning metadata and dependencies for stability. His work included implementing run_export functionality and refining build scripts to improve cross-platform execution. By enhancing package management and metadata, Johan contributed a well-integrated bioinformatics tool that supports reliable distribution and reproducible research within the Bioconda ecosystem.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
2Total
Bugs
0
Commits
2
Features
1
Lines of code
753
Activity Months1
Your Network
544 peopleWork History
November 2025
2 Commits • 1 Features
Nov 1, 2025November 2025 monthly summary for bioconda-recipes: Delivered the MetaxaQR Tool release and completed essential packaging work to enable distribution and reproducibility. The work focused on adding a new metaxaqr feature, aligning licensing, and updating build metadata to support a stable 2.0 rc2 release.
2 Commits • 1 Features
Nov 1, 2025November 2025 monthly summary for bioconda-recipes: Delivered the MetaxaQR Tool release and completed essential packaging work to enable distribution and reproducibility. The work focused on adding a new metaxaqr feature, aligning licensing, and updating build metadata to support a stable 2.0 rc2 release.
November 2025
Activity
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Quality Metrics
Correctness90.0%
Maintainability90.0%
Architecture90.0%
Performance90.0%
AI Usage20.0%
Skills & Technologies
Programming Languages
BashYAML
Technical Skills
YAML configurationbioinformaticsbuild automationpackage managementscript writing
Repositories Contributed To
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