
Worked on the pyrokinetics repository to deliver GS2 core functionality, adding MXH support and enhancing species identification for more accurate simulations. Refactored backend Python code to base species determination on charge data, streamlining input parsing and aligning tests with correct charge information. Expanded unit test coverage using mocking and hard-coded charges to ensure deterministic outcomes. Addressed dependency management by pinning the xarray library to version 2024.11.0, preventing compatibility issues with future releases. This work improved the reliability and maintainability of the codebase, strengthened data handling, and ensured stable workflows for scientific computing in plasma simulation contexts.
January 2025: Delivered MXH support and robust GS2 species handling in the pyrokinetics project, including MXH default parameters, geometry loading, and improved input geotype handling. Refactored species determination to rely on charge data and cleaned input parsing, aligning tests with correct charge information. Enhanced test coverage with charge-aware mocks and hard-coded charges to ensure deterministic behavior. Stabilized dependencies by pinning xarray to 2024.11.0 to avoid incompatibilities with newer releases, ensuring reliable builds and workflows. Overall impact: more accurate GS2 simulations, improved reliability in species identification, and maintainability gains from refactors and tests.
January 2025: Delivered MXH support and robust GS2 species handling in the pyrokinetics project, including MXH default parameters, geometry loading, and improved input geotype handling. Refactored species determination to rely on charge data and cleaned input parsing, aligning tests with correct charge information. Enhanced test coverage with charge-aware mocks and hard-coded charges to ensure deterministic behavior. Stabilized dependencies by pinning xarray to 2024.11.0 to avoid incompatibilities with newer releases, ensuring reliable builds and workflows. Overall impact: more accurate GS2 simulations, improved reliability in species identification, and maintainability gains from refactors and tests.

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