nf-core/modules
Mar 2026 – Apr 2026
2 Months active
Languages Used
NextflowR
Technical Skills
NextflowR scriptingbioinformaticsdata analysissoftware development
Diego Coelho
PROFILE
Diego Coelho
Over a two-month period, contributed to the nf-core/modules repository by developing topic migration and versioned output management features for ASCAT and Cell Ranger Arc modules. Focused on enhancing reproducibility, traceability, and governance of bioinformatics pipelines, the work introduced structured version tracking and improved output management across releases. Leveraged Nextflow and R scripting to implement centralized workflows, automated linting, and test configuration adjustments, ensuring alignment with nf-core best practices. Collaborated with co-authors and automation tools to maintain code quality and integration reliability. The engineering approach emphasized maintainability, accurate release tracking, and robust downstream analysis without prioritizing bug fixes during this period.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
2Total
Bugs
0
Commits
2
Features
2
Lines of code
430
Activity Months2
Work History
April 2026
1 Commits • 1 Features
Apr 1, 2026Month: 2026-04 — nf-core/modules: Key feature delivery and quality improvements focused on Cell Ranger Arc integration. Delivered topic migration and versioned output improvements for the cellrangerarc-mkref module, with automated linting fixes and test configuration adjustments to stabilize CI and downstream usage. This work enhances compatibility with Cell Ranger Arc, ensures accurate version tracking, and improves output management across releases. Maintains alignment with nf-core conventions and prepares for continued validation and rollout.
1 Commits • 1 Features
Apr 1, 2026Month: 2026-04 — nf-core/modules: Key feature delivery and quality improvements focused on Cell Ranger Arc integration. Delivered topic migration and versioned output improvements for the cellrangerarc-mkref module, with automated linting fixes and test configuration adjustments to stabilize CI and downstream usage. This work enhances compatibility with Cell Ranger Arc, ensures accurate version tracking, and improves output management across releases. Maintains alignment with nf-core conventions and prepares for continued validation and rollout.
April 2026
March 2026
1 Commits • 1 Features
Mar 1, 2026March 2026 was focused on delivering a key feature for ASCAT within nf-core/modules, establishing a robust topic migration and version/output management workflow. This work enhances reproducibility, traceability, and governance of ASCAT runs across releases, aligning with nf-core best practices and supporting better downstream analysis and auditing.
March 2026
1 Commits • 1 Features
Mar 1, 2026March 2026 was focused on delivering a key feature for ASCAT within nf-core/modules, establishing a robust topic migration and version/output management workflow. This work enhances reproducibility, traceability, and governance of ASCAT runs across releases, aligning with nf-core best practices and supporting better downstream analysis and auditing.
Activity
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Quality Metrics
Correctness80.0%
Maintainability80.0%
Architecture80.0%
Performance80.0%
AI Usage50.0%
Skills & Technologies
Programming Languages
NextflowR
Technical Skills
NextflowR scriptingbioinformaticsdata analysissoftware development
Repositories Contributed To
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