bioconda/bioconda-recipes
Nov 2024 – Dec 2025
8 Months active
Languages Used
ShellYAML
Technical Skills
Build SystemC++Package ManagementBuild SystemsBuild System ConfigurationYAML configuration
Andreas Füglistaler
PROFILE
Andreas Füglistaler
Andreas Fueglistaler focused on modernizing and maintaining bioinformatics packaging workflows in the bioconda/bioconda-recipes repository, delivering multiple feature releases and upgrades for tools like Atlas and TreeSwirl. He migrated build systems from custom shell scripts to CMake and Ninja, overhauled YAML-based meta.yaml files to reflect evolving dependencies, and expanded automated testing to ensure reproducibility and reliability. Andreas addressed metadata integrity and streamlined dependency management, enabling smoother CI processes and downstream integration. His work leveraged C++, Shell, and YAML, demonstrating depth in build system configuration, package management, and test automation, resulting in robust, maintainable pipelines for scientific software distribution.
Overall Statistics
Feature vs Bugs
88%Features
Repository Contributions
10Total
Bugs
1
Commits
10
Features
7
Lines of code
254
Activity Months8
Your Network
544 peopleWork History
December 2025
1 Commits • 1 Features
Dec 1, 2025December 2025 — Monthly summary for bioconda/bioconda-recipes. Focused on delivering a reliable package upgrade and aligning tests with API changes to preserve build reproducibility and user trust. No critical bugs reported; automated checks and tests were updated to reflect upstream changes, enhancing maintainability and downstream stability.
1 Commits • 1 Features
Dec 1, 2025December 2025 — Monthly summary for bioconda/bioconda-recipes. Focused on delivering a reliable package upgrade and aligning tests with API changes to preserve build reproducibility and user trust. No critical bugs reported; automated checks and tests were updated to reflect upstream changes, enhancing maintainability and downstream stability.
December 2025
November 2025
1 Commits • 1 Features
Nov 1, 2025November 2025: Delivered Atlas Recipe Version 2.0.0 release for bioconda/bioconda-recipes. Updated source URL and build number in meta.yaml to align with upstream Atlas 2.0.0. Verified recipe integrity and prepared changes for downstream consumption, ensuring reproducible builds and compatibility across the Bioconda ecosystem.
November 2025
1 Commits • 1 Features
Nov 1, 2025November 2025: Delivered Atlas Recipe Version 2.0.0 release for bioconda/bioconda-recipes. Updated source URL and build number in meta.yaml to align with upstream Atlas 2.0.0. Verified recipe integrity and prepared changes for downstream consumption, ensuring reproducible builds and compatibility across the Bioconda ecosystem.
July 2025
2 Commits • 1 Features
Jul 1, 2025July 2025 summary: Delivered Atlas packaging updates for RC11 and RC12 in bioconda/bioconda-recipes, focusing on streamlining the build environment and improving reproducibility to accelerate release validation and downstream integration.
2 Commits • 1 Features
Jul 1, 2025July 2025 summary: Delivered Atlas packaging updates for RC11 and RC12 in bioconda/bioconda-recipes, focusing on streamlining the build environment and improving reproducibility to accelerate release validation and downstream integration.
July 2025
May 2025
1 Commits • 1 Features
May 1, 2025May 2025 monthly summary focused on packaging and release readiness for TreeSwirl in the bioconda ecosystem.
May 2025
1 Commits • 1 Features
May 1, 2025May 2025 monthly summary focused on packaging and release readiness for TreeSwirl in the bioconda ecosystem.
April 2025
1 Commits • 1 Features
Apr 1, 2025April 2025: Packaging improvements delivered for the bioconda-recipes repository, focusing on updating critical dependencies and ensuring release-candidate readiness. The Atlas recipe was upgraded to 2.0.0-rc.10 with MKL support for x86, accompanied by build-metadata adjustments to reflect the RC upgrade, enabling more reliable scientific workflows and reproducibility.
1 Commits • 1 Features
Apr 1, 2025April 2025: Packaging improvements delivered for the bioconda-recipes repository, focusing on updating critical dependencies and ensuring release-candidate readiness. The Atlas recipe was upgraded to 2.0.0-rc.10 with MKL support for x86, accompanied by build-metadata adjustments to reflect the RC upgrade, enabling more reliable scientific workflows and reproducibility.
April 2025
March 2025
2 Commits • 1 Features
Mar 1, 2025March 2025 monthly summary for bioconda/bioconda-recipes focused on delivering a robust Atlas packaging upgrade and ensuring reproducible builds. The Atlas recipe was upgraded to 2.0.0-rc.9 across two coordinated commits, updating source URLs, SHA256 checksums, and build numbers to maintain compatibility with downstream workflows.
March 2025
2 Commits • 1 Features
Mar 1, 2025March 2025 monthly summary for bioconda/bioconda-recipes focused on delivering a robust Atlas packaging upgrade and ensuring reproducible builds. The Atlas recipe was upgraded to 2.0.0-rc.9 across two coordinated commits, updating source URLs, SHA256 checksums, and build numbers to maintain compatibility with downstream workflows.
January 2025
1 Commits
Jan 1, 2025Monthly summary for 2025-01 focusing on Bioconda project work on bioconda-recipes, highlighting a critical bug fix that ensures reproducible builds and metadata integrity for the Atlas release candidate.
1 Commits
Jan 1, 2025Monthly summary for 2025-01 focusing on Bioconda project work on bioconda-recipes, highlighting a critical bug fix that ensures reproducible builds and metadata integrity for the Atlas release candidate.
January 2025
November 2024
1 Commits • 1 Features
Nov 1, 2024Month 2024-11 — For bioconda/bioconda-recipes, delivered Atlas 2.0.0-rc.6 through build system modernization and expanded testing. Migrated Atlas build from a custom shell script to CMake and Ninja, overhauled meta.yaml to reflect new dependencies, build requirements, and updated sources for the RC, and extended testing commands to cover additional Atlas functionalities. No major bug fixes were reported this month; the modernization reduces maintenance burden and improves release reliability and validation. Impact: faster, more reliable RC pipelines, easier future upgrades, and better reproducibility. Technologies/skills demonstrated: CMake, Ninja, conda-forge/bioconda recipe management (meta.yaml), YAML, test automation, release engineering, dependency management.
November 2024
1 Commits • 1 Features
Nov 1, 2024Month 2024-11 — For bioconda/bioconda-recipes, delivered Atlas 2.0.0-rc.6 through build system modernization and expanded testing. Migrated Atlas build from a custom shell script to CMake and Ninja, overhauled meta.yaml to reflect new dependencies, build requirements, and updated sources for the RC, and extended testing commands to cover additional Atlas functionalities. No major bug fixes were reported this month; the modernization reduces maintenance burden and improves release reliability and validation. Impact: faster, more reliable RC pipelines, easier future upgrades, and better reproducibility. Technologies/skills demonstrated: CMake, Ninja, conda-forge/bioconda recipe management (meta.yaml), YAML, test automation, release engineering, dependency management.
Activity
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Quality Metrics
Correctness92.0%
Maintainability92.0%
Architecture92.0%
Performance86.0%
AI Usage20.0%
Skills & Technologies
Programming Languages
ShellYAML
Technical Skills
Build SystemBuild System ConfigurationBuild SystemsC++Package ManagementYAML configurationbioinformaticspackage managementtesting
Repositories Contributed To
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