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Haggai Elisha

PROFILE

Haggai Elisha

Developed and integrated a viral recombination detection module for the nf-core/modules repository, leveraging the virusrecom tool to enhance genomic analysis workflows. The work involved implementing end-to-end integration in Nextflow, updating module metadata in YAML, and strengthening test coverage with real and stubbed tests for various input types. Focus was placed on stabilizing the module through targeted fixes, refining documentation, and ensuring consistency across main.nf and meta.yml files. Collaboration with contributors and adherence to nf-core conventions maintained code quality and CI reliability. This addition enables automated, accurate detection of viral recombination, supporting genomic epidemiology research and analysis pipelines.

Overall Statistics

Feature vs Bugs

100%Features

Repository Contributions

1Total
Bugs
0
Commits
1
Features
1
Lines of code
297
Activity Months1

Work History

May 2026

1 Commits • 1 Features

May 1, 2026

May 2026 monthly summary for nf-core/modules: Delivered a new Viral recombination detection module using the virusrecom tool, expanding genomic analysis capabilities. Implemented end-to-end integration, updated module metadata, and strengthened test coverage. Stabilized the module with targeted fixes and documentation improvements, enabling researchers to detect recombination events more reliably. Demonstrated strong collaboration with contributors and cross-team coordination to maintain code quality and CI reliability.

Activity

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Quality Metrics

Correctness80.0%
Maintainability80.0%
Architecture80.0%
Performance80.0%
AI Usage60.0%

Skills & Technologies

Programming Languages

GroovyYAML

Technical Skills

Nextflowbioinformaticsgenomicstesting

Repositories Contributed To

1 repo

Overview of all repositories you've contributed to across your timeline

nf-core/modules

May 2026 May 2026
1 Month active

Languages Used

GroovyYAML

Technical Skills

Nextflowbioinformaticsgenomicstesting