bioconda/bioconda-recipes
Jul 2025 – Jan 2026
2 Months active
Languages Used
ShellYAML
Technical Skills
BioinformaticsBioinformatics Tool PackagingPackage ManagementYAML configurationcondapackage management
Hasindu Gamaarachchi
PROFILE
Hasindu Gamaarachchi
Hasindu managed packaging and compatibility upgrades for bioinformatics tools in the bioconda/bioconda-recipes repository, focusing on reproducibility and cross-platform reliability. Over two months, Hasindu delivered new packages such as blue-crab, a POD5 to SLOW5 file format converter, and minimod, a BAM base modification frequency analysis tool, both with comprehensive metadata, build scripts, and CI testing. Hasindu also upgraded pyslow5 and slow5tools to version 1.4.0, aligning licenses and refining build requirements for broader compatibility. The work leveraged Shell scripting, YAML configuration, and conda package management to streamline deployment and improve interoperability in sequencing data analysis pipelines.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
4Total
Bugs
0
Commits
4
Features
3
Lines of code
138
Activity Months2
Your Network
544 peopleWork History
January 2026
2 Commits • 1 Features
Jan 1, 2026January 2026 monthly summary for bioconda/bioconda-recipes: Delivered a packaging and compatibility upgrade for pyslow5 and slow5tools to version 1.4.0, with license alignment and build metadata improvements. The changes enhance cross-environment reliability, tighten licensing compliance, and reduce downstream build failures, enabling faster and more dependable adoption in bioinformatics pipelines.
2 Commits • 1 Features
Jan 1, 2026January 2026 monthly summary for bioconda/bioconda-recipes: Delivered a packaging and compatibility upgrade for pyslow5 and slow5tools to version 1.4.0, with license alignment and build metadata improvements. The changes enhance cross-environment reliability, tighten licensing compliance, and reduce downstream build failures, enabling faster and more dependable adoption in bioinformatics pipelines.
January 2026
July 2025
2 Commits • 2 Features
Jul 1, 2025July 2025 monthly summary for bioconda/bioconda-recipes focused on delivering two new packages that strengthen data interoperability and BAM-analysis capabilities, with robust packaging, metadata, and testing to support reproducible deployments.
July 2025
2 Commits • 2 Features
Jul 1, 2025July 2025 monthly summary for bioconda/bioconda-recipes focused on delivering two new packages that strengthen data interoperability and BAM-analysis capabilities, with robust packaging, metadata, and testing to support reproducible deployments.
Activity
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Quality Metrics
Correctness95.0%
Maintainability95.0%
Architecture95.0%
Performance95.0%
AI Usage25.0%
Skills & Technologies
Programming Languages
ShellYAML
Technical Skills
BioinformaticsBioinformatics Tool PackagingPackage ManagementYAML configurationcondapackage management
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