bioconda/bioconda-recipes
Dec 2024 – Apr 2026
2 Months active
Languages Used
YAML
Technical Skills
Dependency ManagementPackage Managementbioinformaticsdependency managementpackage management
Jeffrey Barrick
PROFILE
Jeffrey Barrick
Worked on the bioconda/bioconda-recipes repository to enhance cross-platform compatibility and packaging reliability for bioinformatics tools. Addressed macOS compatibility for the isescan recipe by updating its fraggenescan dependency and incrementing the build number, ensuring smoother builds across environments. Later, delivered a targeted update to the Breseq package, resolving compilation issues and introducing a standard library requirement to improve downstream compatibility. Employed skills in dependency management, package management, and YAML to implement and validate these changes. Focused on traceability and reproducibility by referencing specific commits and aligning updates with pull requests, supporting robust CI and user workflows.
Overall Statistics
Feature vs Bugs
50%Features
Repository Contributions
2Total
Bugs
1
Commits
2
Features
1
Lines of code
21
Activity Months2
Your Network
639 peopleWork History
April 2026
1 Commits
Apr 1, 2026April 2026 monthly summary for bioconda/bioconda-recipes focused on Breseq integration. Delivered a critical update to Breseq 0.40.1 to fix compilation issues and add the standard library requirement, improving cross-platform build reliability and downstream compatibility.
1 Commits
Apr 1, 2026April 2026 monthly summary for bioconda/bioconda-recipes focused on Breseq integration. Delivered a critical update to Breseq 0.40.1 to fix compilation issues and add the standard library requirement, improving cross-platform build reliability and downstream compatibility.
April 2026
December 2024
1 Commits • 1 Features
Dec 1, 2024December 2024 monthly summary for bioconda/bioconda-recipes focusing on packaging improvements and cross-platform compatibility. This month centered on ensuring macOS compatibility for a key isescan dependency by updating the fraggenescan requirement to >= 1.32 and incrementing the build number, with full traceability to commit 1cb591f6c82a0783a5989b75c60db435835e6d79 (Update isescan to use fraggenescan >= 1.32 dependency so it is compatible with MacOSX (#52987)).
December 2024
1 Commits • 1 Features
Dec 1, 2024December 2024 monthly summary for bioconda/bioconda-recipes focusing on packaging improvements and cross-platform compatibility. This month centered on ensuring macOS compatibility for a key isescan dependency by updating the fraggenescan requirement to >= 1.32 and incrementing the build number, with full traceability to commit 1cb591f6c82a0783a5989b75c60db435835e6d79 (Update isescan to use fraggenescan >= 1.32 dependency so it is compatible with MacOSX (#52987)).
Activity
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Quality Metrics
Correctness100.0%
Maintainability100.0%
Architecture100.0%
Performance100.0%
AI Usage20.0%
Skills & Technologies
Programming Languages
YAML
Technical Skills
Dependency ManagementPackage Managementbioinformaticsdependency managementpackage management
Repositories Contributed To
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