
Samuel Fogarty developed robust data processing and calibration workflows for the DUNE/ndlar_flow and DUNE/larnd-sim repositories, focusing on detector simulation and data quality. He overhauled pedestal processing by refactoring the architecture into modular Python classes, enabling multi-file HDF5 input and streamlined JSON output. Leveraging skills in Python, shell scripting, and HDF5, Samuel automated pedestal data generation and improved configuration management, enhancing throughput and reproducibility. He also introduced explicit out-of-bounds protection in CUDA-based track pixel mapping for DUNE/larnd-sim, reducing simulation errors. His work demonstrated depth in scientific computing, workflow automation, and maintainable code organization for large-scale detector data pipelines.

July 2025 progress on DUNE/ndlar_flow focused on architectural refactor and automation to scale pedestal processing. Implemented a pedestal processing overhaul into separate classes for histogram generation and pedestal JSON creation, enabling multi-file HDF5 pedestal inputs, with updated configuration and documentation reflecting the new architecture. Added shell-based automation for pedestal data generation for 2x2 and FSD detectors using h5flow, including defined input directories, file lists, outputs, and a workflow YAML. These changes improve throughput, reproducibility, and scalability of the data-processing pipeline.
July 2025 progress on DUNE/ndlar_flow focused on architectural refactor and automation to scale pedestal processing. Implemented a pedestal processing overhaul into separate classes for histogram generation and pedestal JSON creation, enabling multi-file HDF5 pedestal inputs, with updated configuration and documentation reflecting the new architecture. Added shell-based automation for pedestal data generation for 2x2 and FSD detectors using h5flow, including defined input directories, file lists, outputs, and a workflow YAML. These changes improve throughput, reproducibility, and scalability of the data-processing pipeline.
June 2025 focused on delivering core data quality improvements and a streamlined pedestal workflow in DUNE/ndlar_flow. Key features include a Pixel Unique ID generation overhaul that introduces a per-pixel ID mapping using a LUT (later migrated to a dedicated function) and consolidation of ID defaults for pedestal, ADC counts, and gain; a new GeneratePedestals workflow that computes channel pedestals from LArPix data, outputs JSON and HDF5, and is integrated with H5Flow; and targeted calibration fixes addressing prompt hit handling and ADC-to-millivolt calculations. These efforts improve data consistency, processing throughput, and maintainability, enabling more reliable detector calibration, faster onboarding of new data, and clearer documentation.
June 2025 focused on delivering core data quality improvements and a streamlined pedestal workflow in DUNE/ndlar_flow. Key features include a Pixel Unique ID generation overhaul that introduces a per-pixel ID mapping using a LUT (later migrated to a dedicated function) and consolidation of ID defaults for pedestal, ADC counts, and gain; a new GeneratePedestals workflow that computes channel pedestals from LArPix data, outputs JSON and HDF5, and is integrated with H5Flow; and targeted calibration fixes addressing prompt hit handling and ADC-to-millivolt calculations. These efforts improve data consistency, processing throughput, and maintainability, enabling more reliable detector calibration, faster onboarding of new data, and clearer documentation.
April 2025 monthly summary for DUNE/larnd-sim: Implemented an important robustness enhancement by adding explicit out-of-bounds protection in the track pixel mapping code. The boundary checks guard get_track_pixel_map and get_track_pixel_map2 against indexing errors when calculated indices exceed the unique_pix array, significantly reducing crash risk and data corruption in simulations.
April 2025 monthly summary for DUNE/larnd-sim: Implemented an important robustness enhancement by adding explicit out-of-bounds protection in the track pixel mapping code. The boundary checks guard get_track_pixel_map and get_track_pixel_map2 against indexing errors when calculated indices exceed the unique_pix array, significantly reducing crash risk and data corruption in simulations.
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