bioconda/bioconda-recipes
May 2025 – May 2025
1 Month active
Languages Used
CShellYAML
Technical Skills
Build SystemsC DevelopmentCross-Platform DevelopmentPackage Management
Thiago L. A. Miller
PROFILE
Thiago L. A. Miller
During May 2025, Thomas Miller developed and delivered the SideRETRO Conda packaging recipe within the bioconda/bioconda-recipes repository, focusing on enabling reproducible deployments of the sideRETRO tool for Somatic Insertion of DE novo RETROcopies detection. He established a complete packaging and build pipeline, incorporating macOS compatibility patches and detailed Conda metadata to streamline installation and cross-platform support. Leveraging his expertise in C development, build systems, and package management, Thomas ensured that researchers could deploy sideRETRO seamlessly across both macOS and Linux environments. His work addressed reproducibility and ease of distribution, providing a robust foundation for future pipeline deployments.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
1Total
Bugs
0
Commits
1
Features
1
Lines of code
127
Activity Months1
Your Network
486 people
Work History
May 2025
1 Commits • 1 Features
May 1, 2025May 2025: Delivered the SideRETRO Conda packaging recipe for bioconda-recipes, establishing a packaging/build pipeline, macOS compatibility patches, and Conda metadata to enable reproducible deployments. This enables seamless distribution of sideRETRO via Conda and reduces setup time for researchers deploying Somatic Insertion of DE novo RETROcopies pipelines across macOS and Linux environments.
1 Commits • 1 Features
May 1, 2025May 2025: Delivered the SideRETRO Conda packaging recipe for bioconda-recipes, establishing a packaging/build pipeline, macOS compatibility patches, and Conda metadata to enable reproducible deployments. This enables seamless distribution of sideRETRO via Conda and reduces setup time for researchers deploying Somatic Insertion of DE novo RETROcopies pipelines across macOS and Linux environments.
May 2025
Activity
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Quality Metrics
Correctness80.0%
Maintainability80.0%
Architecture80.0%
Performance60.0%
AI Usage20.0%
Skills & Technologies
Programming Languages
CShellYAML
Technical Skills
Build SystemsC DevelopmentCross-Platform DevelopmentPackage Management
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