egenomics/agb2025
May 2025 – Jun 2025
2 Months active
Languages Used
RBashMarkdownPythonShell
Technical Skills
BioinformaticsData AnalysisData VisualizationMicrobiome AnalysisRR Programming
nuriamontala
PROFILE
Nuriamontala
Developed a comprehensive Shiny dashboard for microbiome data analysis in the egenomics/agb2025 repository, focusing on end-to-end workflows from data upload to report generation. Leveraged R, R Shiny, and Python scripting to implement dynamic taxonomic profiling, alpha and beta diversity analyses, and interactive metadata exploration. Enhanced the user experience with automated diversity visualizations, rarefaction normalization, and flexible color palettes, while improving deployment reliability and project organization. Expanded documentation and onboarding materials to streamline adoption for both users and contributors. The work emphasized reproducibility, reduced manual plotting, and established a scalable foundation for future bioinformatics and data visualization enhancements.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
19Total
Bugs
0
Commits
19
Features
4
Lines of code
5,341
Activity Months2
Your Network
25 peopleSame Organization
@estudiant.upf.edu3
Work History
June 2025
11 Commits • 3 Features
Jun 1, 2025June 2025 (2025-06) monthly summary for egenomics/agb2025 focused on delivering end-to-end improvements to diversity visualization, app deployment readiness, and developer/user onboarding. Key work centered on automating and unifying diversity visualizations for reports, improving deployment reliability, and clarifying workflows for new users and contributors.
11 Commits • 3 Features
Jun 1, 2025June 2025 (2025-06) monthly summary for egenomics/agb2025 focused on delivering end-to-end improvements to diversity visualization, app deployment readiness, and developer/user onboarding. Key work centered on automating and unifying diversity visualizations for reports, improving deployment reliability, and clarifying workflows for new users and contributors.
June 2025
May 2025
8 Commits • 1 Features
May 1, 2025In May 2025, delivered a comprehensive Shiny dashboard (egenomics/agb2025) for microbiome data analysis, covering data upload, taxonomic profiling, and alpha/beta diversity analyses, plus metadata exploration and report generation. Introduced a Lifestyle tab and a rich visualization suite with heatmaps and ordination plots, dynamic UI for diversity comparisons, and improved download and statistical testing capabilities. The work emphasizes a seamless end-to-end analytics workflow, enhanced UX, and a scalable foundation for future features.
May 2025
8 Commits • 1 Features
May 1, 2025In May 2025, delivered a comprehensive Shiny dashboard (egenomics/agb2025) for microbiome data analysis, covering data upload, taxonomic profiling, and alpha/beta diversity analyses, plus metadata exploration and report generation. Introduced a Lifestyle tab and a rich visualization suite with heatmaps and ordination plots, dynamic UI for diversity comparisons, and improved download and statistical testing capabilities. The work emphasizes a seamless end-to-end analytics workflow, enhanced UX, and a scalable foundation for future features.
Activity
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Quality Metrics
Correctness88.4%
Maintainability84.2%
Architecture84.6%
Performance78.0%
AI Usage22.2%
Skills & Technologies
Programming Languages
BashMarkdownPythonRShell
Technical Skills
BioinformaticsData AnalysisData ProcessingData VisualizationData WranglingDocumentationFile ManagementMicrobiome AnalysisPython ScriptingRR ProgrammingR ScriptingR ShinyScriptingShell Scripting
Repositories Contributed To
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