compbiozurich/UZH-BIO392
Apr 2025 – May 2025
2 Months active
Languages Used
BashJupyter NotebookMarkdownPythonRR MarkdownHTML
Technical Skills
AdmixtureAdmixture AnalysisBioinformaticsBioinformatics AnalysisCommand Line InterfaceData Analysis
Sara
PROFILE
Sara
Sara Burckhardt developed and maintained robust documentation and analysis workflows for the compbiozurich/UZH-BIO392 repository, focusing on population genetics and bioinformatics. She established consistent naming conventions, centralized project materials, and expanded educational content to streamline onboarding and reproducibility. Using R, RMarkdown, and Bash, Sara delivered PCA and ADMIXTURE plotting frameworks, integrating data loading, merging, and faceted visualization by population. Her work included detailed workflow guidance for PLINK conversion, LD pruning, and variant analysis, as well as technical writing to clarify project steps. The depth of her contributions improved collaboration, data management, and the scalability of reporting within the repository.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
44Total
Bugs
0
Commits
44
Features
24
Lines of code
2,510
Activity Months2
Your Network
55 people
Work History
May 2025
11 Commits • 3 Features
May 1, 2025May 2025 summary for compbiozurich/UZH-BIO392: Focused on feature delivery and documentation improvements to strengthen reproducibility and collaboration around PCA/ADMIXTURE analyses in population genetics. No critical bugs fixed this month; work concentrated on delivering robust plotting capabilities, clarifying analysis workflows, and organizing assets for scalable reporting.
11 Commits • 3 Features
May 1, 2025May 2025 summary for compbiozurich/UZH-BIO392: Focused on feature delivery and documentation improvements to strengthen reproducibility and collaboration around PCA/ADMIXTURE analyses in population genetics. No critical bugs fixed this month; work concentrated on delivering robust plotting capabilities, clarifying analysis workflows, and organizing assets for scalable reporting.
May 2025
April 2025
33 Commits • 21 Features
Apr 1, 2025April 2025 (compbiozurich/UZH-BIO392) focused on establishing a robust documentation baseline and improving repository hygiene to accelerate onboarding, collaboration, and reproducibility. The month emphasized consistent naming conventions, day-specific content organization, and expansion of project materials to support ongoing research tasks.
April 2025
33 Commits • 21 Features
Apr 1, 2025April 2025 (compbiozurich/UZH-BIO392) focused on establishing a robust documentation baseline and improving repository hygiene to accelerate onboarding, collaboration, and reproducibility. The month emphasized consistent naming conventions, day-specific content organization, and expansion of project materials to support ongoing research tasks.
Activity
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Quality Metrics
Correctness96.0%
Maintainability96.0%
Architecture93.6%
Performance93.6%
AI Usage23.6%
Skills & Technologies
Programming Languages
BashHTMLJupyter NotebookMarkdownPythonRR Markdown
Technical Skills
AdmixtureAdmixture AnalysisBioinformaticsBioinformatics AnalysisCommand Line InterfaceData AnalysisData CurationData ManagementData StorageData VisualizationData WranglingDocumentationEducational Content CreationFile ManagementGenetics
Repositories Contributed To
Overview of all repositories you've contributed to across your timeline