compbiozurich/UZH-BIO392
Apr 2025 – May 2025
2 Months active
Languages Used
BashJupyter NotebookMarkdownPythonRR MarkdownHTML
Technical Skills
AdmixtureAdmixture AnalysisBioinformaticsBioinformatics AnalysisCommand Line InterfaceData Analysis
Sara
PROFILE
Sara
Contributed to the compbiozurich/UZH-BIO392 repository by building and organizing documentation, analysis workflows, and plotting frameworks for population genetics research. Established a consistent structure for project materials, including README files and day-specific documentation, to streamline onboarding and reproducibility. Developed RMarkdown-based frameworks for PCA and ADMIXTURE analysis, integrating data loading, merging, and faceted visualization using R and ggplot2. Enhanced workflow guidance with detailed notes on PLINK conversion, LD pruning, and population handling. Focused on robust file management and clear documentation practices, enabling collaborative research and scalable reporting. Work emphasized technical depth in bioinformatics, data analysis, and scientific writing.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
44Total
Bugs
0
Commits
44
Features
24
Lines of code
2,510
Activity Months2
Your Network
76 peopleSame Organization
@gmx.ch49
Shared Repositories
27
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Emily MosbergerMember
Work History
May 2025
11 Commits • 3 Features
May 1, 2025May 2025 summary for compbiozurich/UZH-BIO392: Focused on feature delivery and documentation improvements to strengthen reproducibility and collaboration around PCA/ADMIXTURE analyses in population genetics. No critical bugs fixed this month; work concentrated on delivering robust plotting capabilities, clarifying analysis workflows, and organizing assets for scalable reporting.
11 Commits • 3 Features
May 1, 2025May 2025 summary for compbiozurich/UZH-BIO392: Focused on feature delivery and documentation improvements to strengthen reproducibility and collaboration around PCA/ADMIXTURE analyses in population genetics. No critical bugs fixed this month; work concentrated on delivering robust plotting capabilities, clarifying analysis workflows, and organizing assets for scalable reporting.
May 2025
April 2025
33 Commits • 21 Features
Apr 1, 2025April 2025 (compbiozurich/UZH-BIO392) focused on establishing a robust documentation baseline and improving repository hygiene to accelerate onboarding, collaboration, and reproducibility. The month emphasized consistent naming conventions, day-specific content organization, and expansion of project materials to support ongoing research tasks.
April 2025
33 Commits • 21 Features
Apr 1, 2025April 2025 (compbiozurich/UZH-BIO392) focused on establishing a robust documentation baseline and improving repository hygiene to accelerate onboarding, collaboration, and reproducibility. The month emphasized consistent naming conventions, day-specific content organization, and expansion of project materials to support ongoing research tasks.
Activity
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Quality Metrics
Correctness96.0%
Maintainability96.0%
Architecture93.6%
Performance93.6%
AI Usage23.6%
Skills & Technologies
Programming Languages
BashHTMLJupyter NotebookMarkdownPythonRR Markdown
Technical Skills
AdmixtureAdmixture AnalysisBioinformaticsBioinformatics AnalysisCommand Line InterfaceData AnalysisData CurationData ManagementData StorageData VisualizationData WranglingDocumentationEducational Content CreationFile ManagementGenetics
Repositories Contributed To
Overview of all repositories you've contributed to across your timeline