AFM-SPM/TopoStats
Nov 2024 – Nov 2024
1 Month active
Languages Used
NonePython
Technical Skills
Code CleanupData AnalysisDebuggingImage ProcessingRegression TestingScientific Computing
TomC
PROFILE
Tomc
Developed and integrated a disordered trace DNA width measurement feature for the AFM-SPM/TopoStats repository, focusing on enhancing analytics accuracy for scientific computing workflows. The work involved implementing a static Python method for DNA width calculation and wiring it into the trace_image_disordered pipeline, supporting improved image processing and data analysis. Expanded regression testing and test coverage ensured reliability and robustness of the new functionality, while documentation updates clarified usage and testing scope. Code cleanup efforts, including the removal of debugging prints, improved maintainability and reduced noise. No major bugs were addressed during this period, with efforts concentrated on new feature delivery.
Overall Statistics
Feature vs Bugs
100%Features
Repository Contributions
12Total
Bugs
0
Commits
12
Features
1
Lines of code
164
Activity Months1
Your Network
26 peopleSame Organization
@sheffield.ac.uk16
Shared Repositories
10
ahobbs7Member
Dan BradyMember
EvaMartinCMember
llwigginsMember
Max GamillMember
Neil ShephardMember
Neil ShephardMember
SylviaWhittleMember
TobiFirthMember
Work History
November 2024
12 Commits • 1 Features
Nov 1, 20242024-11: Delivered Disordered Trace DNA Width Measurement in TopoStats (static calculate_dna_width, integration into trace_image_disordered), expanded test coverage and regression targets, updated docs, and cleaned up debugging prints. No major bugs fixed this month. Business value: higher accuracy in disordered-trace DNA width analytics and improved maintainability.
12 Commits • 1 Features
Nov 1, 20242024-11: Delivered Disordered Trace DNA Width Measurement in TopoStats (static calculate_dna_width, integration into trace_image_disordered), expanded test coverage and regression targets, updated docs, and cleaned up debugging prints. No major bugs fixed this month. Business value: higher accuracy in disordered-trace DNA width analytics and improved maintainability.
November 2024
Activity
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Quality Metrics
Correctness80.0%
Maintainability86.6%
Architecture78.4%
Performance63.4%
AI Usage20.0%
Skills & Technologies
Programming Languages
NonePython
Technical Skills
Code CleanupData AnalysisDebuggingImage ProcessingRegression TestingScientific ComputingSoftware DevelopmentSoftware TestingTesting
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